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Listar por autor "Melo, Alba"
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DNA Sequences Alignment in Multi-GPUs: Energy Payoff on Speculative Executions
Pérez-Serrano, Jesús; Sandes, Edans; Melo, Alba; Ujaldon-Martínez, Manuel (2017-05-30)We present a performance per watt analysis of CUDAlign 4.0, a parallel strategy to obtain the optimal alignment of huge DNA se- quences in multi-GPU platforms using the exact Smith-Waterman method. Speed-up factors and ... -
Smith-Waterman Acceleration in Multi-GPUs: A Performance per Watt Analysis
Pérez-Serrano, Jesús; Sandes, Edans; Melo, Alba; Ujaldon-Martínez, Manuel (Springer, 2017)We present a performance per watt analysis of CUDAlign 4.0, a parallel strategy to obtain the optimal alignment of huge DNA se- quences in multi-GPU platforms using the exact Smith-Waterman method. Speed-up factors and ...